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SUMMARY:Molecular recognition by proteins: The dark energy of proteins come
 s to light
LOCATION:Chemistry A101
TZID:America/Denver
DTSTART:20211007T160000
UID:2026-05-05-15-45-10@natsci.colostate.edu
DTSTAMP:20260505T154510
Description:CGSO invited speaker\n\nAbout the Seminar:\n\nThe thermodynamic
 s of molecular recognition by proteins is a central determinant of complex
  biochemistry. For over a half-century\, detailed cryogenic structures hav
 e provided deep insight into the energetic contributions to ligand binding
  by proteins. We have been pursuing the elusive contributions of conformat
 ional entropy. The development of a dynamical proxy based on solution NMR-
 relaxation methods has revealed an unexpected richness in the contribution
 s of conformational entropy to the thermodynamics of ligand binding. The e
 volution of the so-called “entropy meter” from its model-dependent roo
 ts to its current empirically calibrated form will be presented. From this
  work\, it is now abundantly clear that conformational entropy is often a 
 critical element of molecular recognition by soluble proteins. The role of
  solvent entropy has also been examined using a novel NMR approach based o
 n the favorable attributes of confinement provided by reverse micelle enca
 psulation. Recently\, we have approached integral membrane proteins\, whic
 h have eluded a similar characterization. The first examples\, pSRII and O
 mp W\, are found to be more dynamic in the ps-ns time regime than any prev
 iously characterized protein. The corresponding conformational entropy app
 arently stabilizes the folded state in the absence of the classic hydropho
 bic effect. Finally\, despite these insights\, there remains a discomforti
 ng disconnect between protein structure and conformational entropy. Prompt
 ed by the dynamical response of barnase to high pressure\, we performed an
  analysis of the small packing imperfections or voids surrounding over 2\,
 500 methyl-bearing side chains having determined order parameters. Changes
  in unoccupied volume as small as a water molecule surrounding buried side
  chains greatly affects fast motion. The discovered relationship begins to
  permit construction of a united view of the relationship between changes 
 in the internal energy\, provided by structural analysis\, and the conform
 ational entropy\, as represented by fast internal motion\, in the thermody
 namics of protein function.\n\nAbout the Speaker:\n\nProfessor Josh Wand i
 s Professor and Head of Biochemistry and Biophysics at Texas A&amp\;M Univ
 ersity. He also holds joint appointments in the Departments of Chemistry a
 nd Molecular and Cellular Medicine. Dr. Wand received his Ph.D. in biophys
 ics from the University of Pennsylvania in 1984. Following postdoctoral tr
 aining at the National Research Council of Canada in solid-state NMR\, he 
 joined the faculty of the Institute for Cancer Research. He subsequently s
 pent time on the faculties of the University of Illinois at Urbana-Champai
 gn and the State University of New York at Buffalo. He was the Benjamin Ru
 sh Professor of Biochemistry &amp\; Biophysics at the University of Pennsy
 lvania for two decades before joining Texas A &amp\; M University in 2019.
  Dr. Wand teaches undergraduate biochemistry and graduate topics in biophy
 sics and chemistry. He has received over 25 M in research grant support ov
 er his career and published over 200 research and review articles and give
 n over 200 invited seminars and presentations at Universities and conferen
 ces throughout the world. He is a Fellow of the Biophysical Society and a 
 Fellow of the American Physical Society. He continues to apply advanced so
 lution NMR and other techniques to questions in protein biophysics with em
 phasis on dynamics\, entropy and hydration in protein functions such as al
 lostery and a novel route to drug discovery. 4:00 pm
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